Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Primary Metabolic Process (GO:0044238) Genes Targeted by hsa-mir-507 in MM Myeloma Zhan Cluster 33 Table contains all genes in the MM Myeloma Zhan cluster number 33. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-507 GO:0044238 4204 MECP2 methyl CpG binding protein 2 (Rett syndrome) [Source:HGNC Symbol;Acc:6990] T Yes 7555 CNBP CCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:13164] T Yes 23199 KIAA0182 KIAA0182 [Source:HGNC Symbol;Acc:28979] T 3659 IRF1 interferon regulatory factor 1 [Source:HGNC Symbol;Acc:6116] zzz999 Yes 10944 C11orf58 chromosome 11 open reading frame 58 [Source:HGNC Symbol;Acc:16990] zzz999 48 ACO1 aconitase 1, soluble [Source:HGNC Symbol;Acc:117] zzz999 Yes 10260 DENND4A DENN/MADD domain containing 4A [Source:HGNC Symbol;Acc:24321] zzz999 Yes 10589 DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) [Source:HGNC Symbol;Acc:3019] zzz999 Yes 351 APP amyloid beta (A4) precursor protein [Source:HGNC Symbol;Acc:620] zzz999 Yes 2963 GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa [Source:HGNC Symbol;Acc:4653] zzz999 Yes 3202 HOXA5 homeobox A5 [Source:HGNC Symbol;Acc:5106] zzz999 Yes 23168 RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28996] zzz999 Yes 3059 HCLS1 hematopoietic cell-specific Lyn substrate 1 [Source:HGNC Symbol;Acc:4844] zzz999 Yes 26025 PCDHGA12 protocadherin gamma subfamily A, 12 [Source:HGNC Symbol;Acc:8699] zzz999 2790 GNG10 guanine nucleotide binding protein (G protein), gamma 10 [Source:HGNC Symbol;Acc:4402] zzz999 5962 RDX radixin [Source:HGNC Symbol;Acc:9944] zzz999 3276 PRMT1 protein arginine methyltransferase 1 [Source:HGNC Symbol;Acc:5187] zzz999 Yes 2149 F2R coagulation factor II (thrombin) receptor [Source:HGNC Symbol;Acc:3537] T Yes 3815 KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog [Source:HGNC Symbol;Acc:6342] zzz999 Yes 4300 MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 [Source:HGNC Symbol;Acc:7136] T Yes 10447 FAM3C family with sequence similarity 3, member C [Source:HGNC Symbol;Acc:18664] zzz999 5682 PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1 [Source:HGNC Symbol;Acc:9530] zzz999 Yes 4690 NCK1 NCK adaptor protein 1 [Source:HGNC Symbol;Acc:7664] zzz999 Yes 7251 TSG101 tumor susceptibility gene 101 [Source:HGNC Symbol;Acc:15971] zzz999 Yes 3913 LAMB2 laminin, beta 2 (laminin S) [Source:HGNC Symbol;Acc:6487] zzz999 4739 NEDD9 neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:7733] zzz999 7444 VRK2 vaccinia related kinase 2 [Source:HGNC Symbol;Acc:12719] zzz999 Yes 2313 FLI1 Friend leukemia virus integration 1 [Source:HGNC Symbol;Acc:3749] zzz999 Yes 9168 TMSB10 thymosin beta 10 [Source:HGNC Symbol;Acc:11879] zzz999 1140 CHRNB1 cholinergic receptor, nicotinic, beta 1 (muscle) [Source:HGNC Symbol;Acc:1961] zzz999 1662 DDX10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Source:HGNC Symbol;Acc:2735] zzz999 5580 PRKCD protein kinase C, delta [Source:HGNC Symbol;Acc:9399] zzz999 Yes 10670 RRAGA Ras-related GTP binding A [Source:HGNC Symbol;Acc:16963] zzz999 23338 PHF15 PHD finger protein 15 [Source:HGNC Symbol;Acc:22984] T Yes 4163 MCC mutated in colorectal cancers [Source:HGNC Symbol;Acc:6935] T 23365 ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 [Source:HGNC Symbol;Acc:14193] zzz999 837 CASP4 caspase 4, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1505] zzz999 Yes 5450 POU2AF1 POU class 2 associating factor 1 [Source:HGNC Symbol;Acc:9211] zzz999 Yes 391 RHOG ras homolog gene family, member G (rho G) [Source:HGNC Symbol;Acc:672] zzz999 Yes 5954 RCN1 reticulocalbin 1, EF-hand calcium binding domain [Source:HGNC Symbol;Acc:9934] zzz999 549 AUH AU RNA binding protein/enoyl-CoA hydratase [Source:HGNC Symbol;Acc:890] zzz999 Yes 2040 STOM stomatin [Source:HGNC Symbol;Acc:3383] zzz999 1000 CDH2 cadherin 2, type 1, N-cadherin (neuronal) [Source:HGNC Symbol;Acc:1759] zzz999 546 ATRX alpha thalassemia/mental retardation syndrome X-linked [Source:HGNC Symbol;Acc:886] T Yes 6916 TBXAS1 thromboxane A synthase 1 (platelet) [Source:HGNC Symbol;Acc:11609] zzz999 Yes 1207 CLNS1A chloride channel, nucleotide-sensitive, 1A [Source:HGNC Symbol;Acc:2080] zzz999 Yes 9844 ELMO1 engulfment and cell motility 1 [Source:HGNC Symbol;Acc:16286] zzz999 8726 EED embryonic ectoderm development [Source:HGNC Symbol;Acc:3188] zzz999 Yes 329 BIRC2 baculoviral IAP repeat containing 2 [Source:HGNC Symbol;Acc:590] zzz999 Yes 10978 CLP1 CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16999] zzz999 Yes 5436 POLR2G polymerase (RNA) II (DNA directed) polypeptide G [Source:HGNC Symbol;Acc:9194] zzz999 Yes 5936 RBM4 RNA binding motif protein 4 [Source:HGNC Symbol;Acc:9901] zzz999 Yes 399979 SNX19 sorting nexin 19 [Source:HGNC Symbol;Acc:21532] zzz999 55135 WRAP53 WD repeat containing, antisense to TP53 [Source:HGNC Symbol;Acc:25522] zzz999 Yes 900 CCNG1 cyclin G1 [Source:HGNC Symbol;Acc:1592] zzz999 Yes 654 BMP6 bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:1073] zzz999 Yes 3603 IL16 interleukin 16 (lymphocyte chemoattractant factor) [Source:HGNC Symbol;Acc:5980] T Yes 740 MRPL49 mitochondrial ribosomal protein L49 [Source:HGNC Symbol;Acc:1176] zzz999 Yes 8395 PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta [Source:HGNC Symbol;Acc:8995] T Yes 4783 NFIL3 nuclear factor, interleukin 3 regulated [Source:HGNC Symbol;Acc:7787] zzz999 Yes 4863 NPAT nuclear protein, ataxia-telangiectasia locus [Source:HGNC Symbol;Acc:7896] T Yes 9646 CTR9 Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16850] T Yes 23404 EXOSC2 exosome component 2 [Source:HGNC Symbol;Acc:17097] zzz999 Yes 2965 GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa [Source:HGNC Symbol;Acc:4655] P T Yes 9034 CCRL2 chemokine (C-C motif) receptor-like 2 [Source:HGNC Symbol;Acc:1612] zzz999 7405 UVRAG UV radiation resistance associated gene [Source:HGNC Symbol;Acc:12640] zzz999 Yes 1910 EDNRB endothelin receptor type B [Source:HGNC Symbol;Acc:3180] T Yes 5796 PTPRK protein tyrosine phosphatase, receptor type, K [Source:HGNC Symbol;Acc:9674] P T Yes 7474 WNT5A wingless-type MMTV integration site family, member 5A [Source:HGNC Symbol;Acc:12784] T Yes 9595 CYTIP cytohesin 1 interacting protein [Source:HGNC Symbol;Acc:9506] T 22795 NID2 nidogen 2 (osteonidogen) [Source:HGNC Symbol;Acc:13389] P T Yes 4928 NUP98 nucleoporin 98kDa [Source:HGNC Symbol;Acc:8068] zzz999 Yes 2395 FXN frataxin [Source:HGNC Symbol;Acc:3951] T Yes 10524 KAT5 K(lysine) acetyltransferase 5 [Source:HGNC Symbol;Acc:5275] zzz999 Yes 6310 ATXN1 ataxin 1 [Source:HGNC Symbol;Acc:10548] zzz999 Yes 3592 IL12A interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) [Source:HGNC Symbol;Acc:5969] zzz999 Yes 6309 SC5DL sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like [Source:HGNC Symbol;Acc:10547] T Yes 6418 SET SET nuclear oncogene [Source:HGNC Symbol;Acc:10760] zzz999 Yes 7518 XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:HGNC Symbol;Acc:12831] P T Yes 2960 GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa [Source:HGNC Symbol;Acc:4650] T Yes 5411 PNN pinin, desmosome associated protein [Source:HGNC Symbol;Acc:9162] P T Yes 2047 EPHB1 EPH receptor B1 [Source:HGNC Symbol;Acc:3392] T Yes

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